public class SeqIO
extends java.lang.Object
Constructor and Description |
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SeqIO() |
Modifier and Type | Method and Description |
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static void |
dumpEdges(SeqGraph graph,
java.io.PrintStream out) |
static void |
dumpEdgesByNode(SeqGraph graph,
java.io.PrintStream out) |
static SeqGraph |
read(java.io.File file) |
static void |
write(SeqGraph graph,
java.io.PrintStream out) |
static void |
write(SeqGraph graph,
java.io.PrintWriter out) |
static void |
write(SeqGraph graph,
SeqPhase phase,
java.io.PrintWriter out) |
static void |
writeNodes(SeqGraph graph,
java.io.PrintStream out) |
static void |
writeNodes(SeqGraph graph,
java.io.PrintWriter out) |
public static SeqGraph read(java.io.File file) throws java.lang.Exception
java.lang.Exception
public static void write(SeqGraph graph, java.io.PrintStream out)
public static void write(SeqGraph graph, java.io.PrintWriter out)
public static void writeNodes(SeqGraph graph, java.io.PrintWriter out)
public static void writeNodes(SeqGraph graph, java.io.PrintStream out)
public static void dumpEdges(SeqGraph graph, java.io.PrintStream out)
public static void dumpEdgesByNode(SeqGraph graph, java.io.PrintStream out)