What is being modeled?
Genome scale model of metabolism
Description & purpose of resource
This is a Biocyc genome-scale model of Neurospora crassa, with on-going curation including metabolism, regulation, and genome, adopted from the original work by Dreyfuss, Zucker, et al. (https://doi.org/10.1371/journal.pcbi.1003126).
Spatial scales
molecular
cellular
Temporal scales
10-6 - 10-3 s
10-3 - 1 s
1 - 103 s
hours
days
This resource is currently
mature and useful in ongoing research
Has this resource been validated?
Yes
How has the resource been validated?
This knowledgebase has previously been extensively curated with experimental data, and additional curation is on-going.
Can this resource be associated with other resources? (e.g.: modular models, linked tools and platforms)
Yes
Which resources?
The a genome scale flux-balance model is linked to the database.
Key publications (e.g. describing or using resource)
Original publication: https://doi.org/10.1371/journal.pcbi.1003126.
DOI link to publication describing this resource
Collaborators
Bill Cannon
PI contact information
jeremy.zucker@pnnl.gov
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