JSim JWS Models Page | Interagency Modeling and Analysis Group

This page allows users to run models from the JWS Online Models Database under JSim. To run these models online, you must have Java installed on your computer. To run them in JSim on your own computer, download the model code and the JSim application. Either way, see Running JSim for instructions on how to use JSim. Since these models do not specify simulation time length or delta, these must be set by the user before running the model.

Note: Models on this page require JSim version 1.6.84 or above.

Return to complete JSim model archives.

Currently available models

Number of models in this archive: 68
Number of models currently runnable under JSim: 63

Displaying 1 - 20 of 68

assmus : Potato tuber

assmus: [View MML]

ataullakhanov : The Regulation of Glycolysis in Human Erythrocytes

ataullakhanov: [View MML]

attila : Analysis of a Generic Model of Eukaryotic Cell-Cycle Regulation

attila: [View MML]

bali : A modelling study of feedforward activation in

bali: [View MML]

bhartiya : Dynamic model of Escherichia coli tryptophan operon shows an optimal structural design

bhartiya: [View MML]

bradshaw : A computational model of mitochondrial deoxynucleotide metabolism and DNA replication.

bradshaw: [JSim version not yet available]

branch3 : None

branch3: [View MML]

branch5 : None

branch5: [View MML]

bruggeman : The multifarious short-term regulation of ammonium assimilation of Escherichia coli: dissection using an in silico replica

bruggeman: [View MML]

bruggeman2 : Time-dependent hierarchical regulation analysis: deciphering cellular adaptation

bruggeman2: [View MML]

chassagnole1 : Dynamic Modeling of the Central Carbon Metabolism of Eschericia coli

chassagnole1: [View MML]

chassagnole2 : Control of the threonine-synthesis pathway in Escherichia coli :a theoretical and experimental approach

chassagnole2: [View MML]

chen : Kinetic analysis of a molecular model of the budding yeast cell cycle.

chen: [View MML]

chen2 : Integrative analysis of cell cycle control in budding yeast.

chen2: [View MML]

ciliberto : Mathematical model of the morphogenesis checkpoint in budding yeast.

ciliberto: [View MML]

cronwright : Metabolic Control Analysis of Glycerol Synthesis inSaccharomyces cerevisiae

cronwright: [View MML]

curien : A kinetic model of the branch-point between the methionine and threonine biosynthesis pathways in Arabidopsis thaliana

curien: [View MML]

dano1 : Reduction of a biochemical model with preservation of its basic dynamic properties

dano1: [View MML]

dano2 : Reduction of a biochemical model with preservation of its basic dynamic properties

dano2: [View MML]

dano3 : Reduction of a biochemical model with preservation of its basic dynamic properties

dano3: [View MML]