JSim CellML Models Page
This page allows users to run models from the CellML model archive under JSim. To run these models online, you must have Java installed on your computer. To run them in JSim on your own computer, download the model code and the JSim application. Either way, see Running JSim for instructions on how to use JSim. Since CellML models do not specify simulation time length or delta, these must be set by the user before running the model.
Users are strongly advised to read Running CellML Models under JSim before running CellML models under JSim.
Currently available models
- Number of CellML v1.0 models in the archive: 910
- Number of those models runnable under JSim: 840
- Number of those models passing unit balance: 698
- Models not passing unit balance are indicated by
Displaying 101 - 120 of 486
CML0102 : Protein phosphorylation driven by intracellular calcium oscillations: A kinetic analysis
- dupont_goldbeter_1992:
- dupont_1992a: [View MML]
- dupont_1992b: [View MML]
- dupont_1992b_1.1model: [View file]
- dupont_1992_1.1model: [View file]
CML0103 : A Model of the Single Atrial Cell: Relation between Calcium Current and Calcium Release
- earm_noble_1990:
- earm_noble_1990: [View MML]
CML0104 : Fast sodium current in cardiac muscle: A quantitative description
- ebihara_johnson_1980:
- ebihara_johnson_1980: [View MML]
CML0105 : Rhythmic secretion of prolactin in rats: action of oxytocin coordinated by vasoactive intestinal polypeptide of suprachiasmatic nucleus origin
- egli_bertram_sellix_freeman_2004:
- egli_bertram_sellix_freeman_2004: [View MML]
CML0106 : A Synthetic Oscillatory Network of Transciptional Regulators
- elowitz_leibler_2000:
- elowitz_leibler_2000: [View MML]
CML0107 : On the stability of a model of testosterone dynamics
- enciso_sontag_2004:
- enciso_sontag_2004: [View MML]
CML0108 : Chaos in Weakly-coupled Pacemaker Cells
- endresen_1996:
- endresen_1996: [View MML]
CML0109 : Kinetics of the Reverse Mode of the Na+/Glucose Cotransporter
- eskandari_wright_loo_2005:
- Eskandari_et_al_2005: [View MML]
CML0111 : A mathematical model for the in vitro kinetics of the anti-cancer agent topotecan
- evans_errington_shelly_feeney_chapman_godfrey_smith_chappell_2004:
- evans_errington_shelly_feeney_chapman_godfrey_smith_chappell_200: [View MML]
CML0112 : Action potential and contractility changes in [Na(+)](i) overloaded cardiac myocytes: a simulation study.
- faber_rudy_2000:
- faber_rudy_2000: [View MML]
- faber_rudy_modified_version_2000: [View MML]
CML0113 : Mitochondrial Modulation of Intracellular Ca2+ Signalling
- fall_keizer_2001:
- fall_keizer_2001: [View MML]
CML0114 : Computational Model for Effects of Ligand/Receptor Binding Properties on Interleukin-2 Trafficking Dynamics and T Cell Proliferation Response
- fallon_lauffenburger_2000:
- fallon_lauffenburger_2000: [View MML]
CML0115 : Model-projected mechanistic bases for sex differences in growth hormone regulation in humans.
- farhy_bowers_veldhuis_2007:
- farhy_bowers_veldhuis_2007_a: [View MML]
- farhy_bowers_veldhuis_2007_b: [View MML]
CML0116 :
- faville_pullan_sanders_koh_lloyd_smith_2009:
- faville_model_2008: [View MML]
- faville_pacemaker_unit_2008: [View MML]
CML0117 : A Biophysically Based Mathematical Model of Unitary Potential Activity in Interstitial Cells of Cajal
- faville_pullan_sanders_smith_2008:
- faville_pullan_sanders_smith_2008: [View MML]
CML0118 : Vortex dynamics in three-dimensional continuous myocardium with fiber rotation: Filament instability and fibrillation
- fenton_karma_1998:
- fenton_karma_1998_BR: [View MML]
- fenton_karma_1998_GP: [View MML]
- fenton_karma_1998_MBR: [View MML]
- fenton_karma_1998_MLR1: [View MML]
CML0119 :
- fenton_karma_2006:
- fenton_karma_2006: [View MML]
CML0120 : Contributions of HERG K+ current to repolarization of the human ventricular action potential
- fink_noble_virag_varro_giles_2008:
- fink_noble_virag_varro_giles_2008: [View MML]
CML0121 : Determination of time-dependent inositol-1,4,5-triphosphate concentrations during calcium release in a smooth muscle cell
- fink_slepchenko_loew_1999:
- fink_slepchenko_loew_1999: [View MML]
CML0122 : An image-based model of calcium waves in differentiated neuroblastoma cells
- fink_slepchenko_moraru_watras_schaff_loew_2000:
- fink_slepchenko_moraru_watras_schaff_loew_2000: [View MML]