JSim CellML Models Page
This page allows users to run models from the CellML model archive under JSim. To run these models online, you must have Java installed on your computer. To run them in JSim on your own computer, download the model code and the JSim application. Either way, see Running JSim for instructions on how to use JSim. Since CellML models do not specify simulation time length or delta, these must be set by the user before running the model.
Users are strongly advised to read Running CellML Models under JSim before running CellML models under JSim.
Currently available models
- Number of CellML v1.0 models in the archive: 910
- Number of those models runnable under JSim: 840
- Number of those models passing unit balance: 698
- Models not passing unit balance are indicated by
Displaying 321 - 340 of 486
CML0326 : A Model of Cardiac Muscle Mechanics and Energetics
- panerai_1980:
- panerai_1980: [View MML]
CML0327 : Electrogenic Properties of the Cloned Na+/Glucose Cotransporter: II. A Transport Model under Nonrapid Equilibrium Conditions
- parent_supplisson_loo_wright_1992:
- Parent_et_al_1992: [View MML]
CML0328 :
- pasek_simurda_christe_2006:
- pasek_model_2006: [View MML]
- pasek_model_2006_surface_membrane: [View MML]
- pasek_model_2006_tubular_membrane: [View MML]
- pasek_simurda_christe_2006_a: [View MML]
- pasek_simurda_christe_2006_b: [View MML]
CML0329 : A model of the guinea-pig ventricular cardiac myocyte incorporating a transverse-axial tubular system
- pasek_simurda_orchard_christe_2008:
- pasek_simurda_orchard_christe_2008: [View MML]
CML0330 : Intra- and inter-islet synchronization of metabolically driven insulin secretion
- pedersen_bertram_sherman_2005:
- pedersen_bertram_sherman_2005: [View MML]
CML0331 : Dynamics of HIV infection of CD4+ T cells
- perelson_kirschner_deboer_1993:
- perelson_1993a: [View MML]
- perelson_1993b: [View MML]
- perelson_1993c: [View MML]
- perelson_1993d: [View MML]
CML0332 : HIV-1 dynamics in vivo: virion clearance rate, infected cell life-span, and viral generation time
- perelson_neumann_markowitz_leonard_ho_1996:
- perelson_neumann_markowitz_leonard_ho_1996: [View MML]
CML0333 :
- peterson_riggs_2010:
- peterson_2010: [View MML]
CML0334 : A quantitative model of sleep-wake dynamics based on the physiology of the brainstem ascending arousal system
- phillips_2007:
- phillips_2007: [View MML]
CML0335 : Sleep deprivation in a quantitative physiologically based model of the ascending arousal system
- phillips_2008:
- phillips_baseline_2008: [View MML]
- phillips_sleep_deprivation_2008: [View MML]
CML0336 : Model structure and control of bone remodeling: a theoretical study
- pivonka_zimak_smith_gardiner_dunstan_sims_martin_mundy_2008:
- pivonka_2008_matlab: [View MML]
CML0337 : Bifurcation and resonance in a model for bursting nerve cells
- plant_1981:
- plant_1981: [View MML]
CML0338 : Response to continuous and pulsatile PTH dosing: a mathematical model for parathyroid hormone receptor kinetics
- potter_greller_cho_nuttall_stroup_suva_tobin_2005:
- potter_greller_cho_nuttall_stroup_suva_tobin_2005_a: [View MML]
- potter_greller_cho_nuttall_stroup_suva_tobin_2005_b: [View MML]
CML0339 : Mathematical model for the androgenic regulation of the prostate in intact and castrated adult male rats.
- potter_zager_barton_2006:
- potter_zager_barton_2006: [View MML]
CML0340 : Simulation Study of Cellular Electrical Properties in Heart Failure
- priebe_beuckelmann_1998:
- priebe_beuckelmann_1998: [View MML]
CML0341 : Modelling the actions of chaperones and their role in ageing.
- proctor_2005:
- proctor_soti_boys_gillespie_shanley_wilkinson_kirkwood_2005: [View MML]
CML0342 : An in silico model of the ubiquitin-proteasome system that incorporates normal homeostasis and age-related decline
- proctor_2007:
- proctor_tsirigotis_gray_2007: [View MML]
CML0343 : LabHEART: an interactive computer model of rabbit ventricular myocyte ion channels and Ca transport
- puglisi_bers_2001:
- puglisi_bers_2001: [View MML]
CML0344 : Ionic Current Model of a Hypoglossal Motoneuron
- purvis_butera_2005:
- purvis_butera_2005: [View MML]
CML0345 : Intrinsic Bursters Increase the Robustness of Rythm Generation in an Excitatory Network
- purvis_smith_koizumi_butera_2007:
- purvis_smith_koizumi_butera_2007: [View MML]
- purvis_smith_koizumi_butera_2007_npc: [View MML]