JSim CellML Models Page
This page allows users to run models from the CellML model archive under JSim. To run these models online, you must have Java installed on your computer. To run them in JSim on your own computer, download the model code and the JSim application. Either way, see Running JSim for instructions on how to use JSim. Since CellML models do not specify simulation time length or delta, these must be set by the user before running the model.
Users are strongly advised to read Running CellML Models under JSim before running CellML models under JSim.
Currently available models
- Number of CellML v1.0 models in the archive: 910
- Number of those models runnable under JSim: 840
- Number of those models passing unit balance: 698
- Models not passing unit balance are indicated by
Displaying 361 - 380 of 486
CML0366 : Modeling latently infected cell activation: viral and latent reservoir persistence, and viral blips in HIV-infected patients on potent therapy
- rong_perelson_2009:
- rong_2009a: [View MML]
- rong_2009b: [View MML]
CML0367 : Modelling of calcium handling in airway myocytes
- roux_noble_noble_marhl_2006:
- roux_noble_noble_marhl_2006: [View MML]
CML0368 : Multiple rhythmic states in a model of the respiratory central pattern generator
- rubin_shevtsova_ermentrout_smith_rybak_2009:
- rubin_2009: [View MML]
CML0369 : Modeling of Protein Interactions Involved in Cardiac Tension Development
- sachse_glanzel_seemann_2003:
- sachse_glanzel_seemann_2003: [View MML]File: sachse_glanzel_seemann_2003.mod does Not exist!
CML0370 : Electrophysiological Modeling of Fibroblasts and Their Interaction with Myocytes
- sachse_moreno_abildskov_2008:
- sachse_moreno_abildskov_2008_a: [View MML]
- sachse_moreno_abildskov_2008_b: [View MML]
CML0371 : Markovian Models of Low and High Activity Levals of Cardiac Ryanodine Receptors
- saftenku_williams_sitsapesan_2001:
- saftenku_williams_sitsapesan_2001_H1_model: [View MML]
- saftenku_williams_sitsapesan_2001_H2_model: [View MML]
- saftenku_williams_sitsapesan_2001_low_model: [View MML]
CML0372 : Distribution of a persistent sodium current across the ventricular wall in guinea pigs.
- sakmann_spindler_bryant_linz_noble_2000:
- sakmann_spindler_bryant_linz_noble_2000_a: [View MML]
- sakmann_spindler_bryant_linz_noble_2000_b: [View MML]
- sakmann_spindler_bryant_linz_noble_2000_c: [View MML]
CML0373 : Mechanistic Model of Myocardial Energy Metabolism Under Normal and Ischemic Conditions
- salem_saidel_stanley_cabrera_2002:
- salem_saidel_stanley_cabrera_2002: [View MML]
CML0374 : Role of individual ionic current systems in the SA node hypothesized by a model study
- sarai_matsuoka_kuratomi_ono_noma_2003:
- sarai_matsuoka_kuratomi_ono_noma_2003: [View MML]
CML0375 : Cell-Level Pharmacokinetic Model of Granulocyte Colony-Stimulating Factor: Implications for Ligand Lifetime and Potency in Vivo
- sarkar_lauffenburger_2003:
- sarkar_lauffenburger_2003: [View MML]
CML0376 :
- saucerman_bers_2008:
- saucerman_2008_cytosol: [View MML]
- saucerman_2008_dyadic_cleft: [View MML]
- saucerman_2008_sarcolemma: [View MML]
- saucerman_bers_2008: [View MML]
CML0377 : Modeling beta-adrenergic control of cardiac myocyte contractility in silico
- saucerman_brunton_michailova_mcculloch_2003:
- saucerman_brunton_michailova_mcculloch_2003: [View MML]File: saucerman_brunton_michailova_mcculloch_2003.mod does Not exist!
CML0378 : Mechanistic systems models of cell signaling networks: a case study of myocyte adrenergic regulation
- saucerman_mcculloch_2004:
- saucerman_mcculloch_2004: [View MML]
CML0379 : A model for AIDS pathogenesis
- schenzle_1994:
- schenzle_1994: [View MML]
CML0380 : A model of gonadotropin regulation during the menstrual cycle in women: qualitative features
- schlosser_selgrade_2000:
- schlosser_selgrade_2000: [View MML]
CML0381 : Myocardial Material Parameter Estimation - A Comparative Study for Simple Shear
- schmid_nash_young_hunter_2006:
- schmid_nash_young_hunter_2006_a: [View MML]
- schmid_nash_young_hunter_2006_b: [View MML]
CML0382 : Mechanism of the Frank-Starling law-- A simulation study with a novel cardiac muscle contraction model that includes titin and tropomyosin
- schneider_shimayoshi_amano_matsuda_2006:
- schneider_shimayoshi_amano_matsuda_2006: [View MML]
CML0383 : Computational Modeling of the Dynamics of the MAP Kinase Cascade Activated by Surface and Internalized EGF Receptors.
- schoeberl_eichlerjonsson_gilles_muller_2002:
- Schoeberl_EichlerJonsson_Gilles_Muller_2002: [View MML]
CML0384 : Modelling the electrophysiological endothelial cell response to bradykinin
- schuster_beny_meister_2003:
- schuster_beny_meister_2003: [View MML]
CML0385 : A mathematical model of metabolic insulin signaling pathways
- sedaghat_sherman_quon_2002:
- sedaghat_sherman_quon_2002: [View MML]
- sedaghat_sherman_quon_2002_feedback: [View MML]